org.jmol.modelsetbio

Class Helix

java.lang.Object

org.jmol.modelsetbio.ProteinStructure

org.jmol.modelsetbio.Helix

public class Helix
extends ProteinStructure

Field Summary

Fields inherited from class org.jmol.modelsetbio.ProteinStructure

apolymer, axisA, axisB, axisUnitVector, monomerCount, monomerIndexFirst, serialID, strandCount, strucNo, structureID, subtype, type, vectorProjection

Constructor Summary

Constructors

Constructor and Description
Helix(AlphaPolymer apolymer, int monomerIndex, int monomerCount, EnumStructure subtype)

Method Summary

Methods

Modifier and Type	Method and Description
void	calcAxis()

Methods inherited from class org.jmol.modelsetbio.ProteinStructure

addMonomer, calcSegments, getAxisEndPoint, getAxisStartPoint, getIndex, getInfo, getMonomerCount, getMonomerIndex, getSegments, getStructureMidPoint, isWithin, lowerNeighborIsHelixOrSheet, removeMonomer, resetAxes, setupPS, upperNeighborIsHelixOrSheet

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Helix

Helix(AlphaPolymer apolymer,
     int monomerIndex,
     int monomerCount,
     EnumStructure subtype)

Method Detail

calcAxis

public void calcAxis()

Overrides:

calcAxis in class ProteinStructure