org.jmol.renderbio

Class RocketsRenderer

java.lang.Object

org.jmol.render.ShapeRenderer

org.jmol.render.MeshRenderer

org.jmol.renderbio.BioShapeRenderer

org.jmol.renderbio.TraceRenderer

org.jmol.renderbio.StrandsRenderer

org.jmol.renderbio.MeshRibbonRenderer

org.jmol.renderbio.RocketsRenderer

Direct Known Subclasses:

CartoonRenderer

public class RocketsRenderer
extends MeshRibbonRenderer

Field Summary

Fields

Modifier and Type	Field and Description
private static byte[]	arrowHeadFaces
private static byte[]	boxFaces
protected P3[]	cordMidPoints
private P3[]	corners
private int	endIndexPending
private V3	lengthVector
protected boolean	newRockets
private P3	pointCorner
private P3	pointTipOffset
private ProteinStructure	proteinstructurePending
protected boolean	renderArrowHeads
private V3	scaledHeightVector
private V3	scaledWidthVector
private P3	screenA
private P3	screenB
private P3	screenC
private P3[]	screenCorners
private int	startIndexPending
protected boolean	tPending
private V3	vtemp

Fields inherited from class org.jmol.renderbio.StrandsRenderer

baseStrandOffset, strandCount, strandSeparation

Fields inherited from class org.jmol.renderbio.BioShapeRenderer

bsVisible, cartoonsFancy, colixBack, colixes, colixesBack, controlPoints, controlPointScreens, isCarbohydrate, isNucleic, isPass2, leadAtomIndices, mads, monomerCount, monomers, ribbonBottomScreens, ribbonTopScreens, structureTypes, wingVectors, wireframeOnly

Fields inherited from class org.jmol.render.MeshRenderer

antialias, bsPolygons, bsPolygonsToExport, diameter, exportPass, frontOnly, haveBsDisplay, imageFontScaling, isGhostPass, isTranslucent, isTranslucentInherit, latticeOffset, mesh, needTranslucent, normixes, pt1f, pt1i, pt2f, pt2i, pt3i, scalePixelsPerMicron, screens, selectedPolyOnly, thePlane, transformedVectors, vertexCount, vertices, volumeRender, width

Fields inherited from class org.jmol.render.ShapeRenderer

colix, exportType, g3d, isExport, mad, madBeg, madEnd, madMid, modelSet, myVisibilityFlag, shape, shapeID, viewer

Constructor Summary

Constructors

Constructor and Description
RocketsRenderer()

Method Summary

Methods

Modifier and Type	Method and Description
(package private) void	buildArrowHeadBox(P3 pointCorner, V3 scaledWidthVector, V3 scaledHeightVector, P3 pointTip)
(package private) void	buildBox(P3 pointCorner, V3 scaledWidthVector, V3 scaledHeightVector, V3 lengthVector)
protected void	calcRopeMidPoints(boolean isNewStyle)
(package private) void	drawArrowHeadBox(P3 base, P3 tip)
(package private) void	drawBox(P3 pointA, P3 pointB)
protected boolean	isSheet(int i)
protected void	renderBioShape(BioShape bioShape)
protected void	renderCone(int i, P3 pointBegin, P3 pointEnd, P3 screenPtBegin, P3 screenPtEnd)
protected void	renderPending()
private void	renderPendingRocketSegment(int i, P3 pointStart, P3 pointBeforeEnd, P3 pointEnd, boolean tEnd)
private void	renderPendingSheet(P3 pointStart, P3 pointBeforeEnd, P3 pointEnd, boolean tEnd)
protected void	renderRockets()
protected void	renderSpecialSegment(Monomer monomer, short thisColix, short thisMad)

Methods inherited from class org.jmol.renderbio.MeshRibbonRenderer

render2Strand, renderMeshRibbon

Methods inherited from class org.jmol.renderbio.StrandsRenderer

renderStrands, renderStrandShape, setStrandCount

Methods inherited from class org.jmol.renderbio.TraceRenderer

renderTrace

Methods inherited from class org.jmol.renderbio.BioShapeRenderer

adjustCartoonSeamNormals, calcScreenControlPoints, calcScreens, getLeadColix, getLeadColixBack, getScreenControlPoints, isHelix, render, renderHermiteArrowHead, renderHermiteConic, renderHermiteCylinder, renderHermiteRibbon, setBioColix

Methods inherited from class org.jmol.render.MeshRenderer

checkNormals, drawLine, drawTriangle, exportSurface, isPolygonDisplayable, render2, render2b, renderMesh, renderMesh2, renderPoints, renderTriangles, setColix

Methods inherited from class org.jmol.render.ShapeRenderer

initRenderer, renderShape, setViewerG3dShapeID

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

newRockets

protected boolean newRockets

renderArrowHeads

protected boolean renderArrowHeads

cordMidPoints

protected P3[] cordMidPoints

tPending

protected boolean tPending

proteinstructurePending

private ProteinStructure proteinstructurePending

startIndexPending

private int startIndexPending

endIndexPending

private int endIndexPending

screenA

private P3 screenA

screenB

private P3 screenB

screenC

private P3 screenC

vtemp

private V3 vtemp

boxFaces

private static final byte[] boxFaces

corners

private final P3[] corners

screenCorners

private final P3[] screenCorners

pointTipOffset

private final P3 pointTipOffset

scaledWidthVector

private final V3 scaledWidthVector

scaledHeightVector

private final V3 scaledHeightVector

arrowHeadFaces

private static final byte[] arrowHeadFaces

lengthVector

private final V3 lengthVector

pointCorner

private final P3 pointCorner

Constructor Detail

RocketsRenderer

public RocketsRenderer()

Method Detail

renderBioShape

protected void renderBioShape(BioShape bioShape)

Overrides:

renderBioShape in class MeshRibbonRenderer

isSheet

protected boolean isSheet(int i)

calcRopeMidPoints

protected void calcRopeMidPoints(boolean isNewStyle)

renderRockets

protected void renderRockets()

renderSpecialSegment

protected void renderSpecialSegment(Monomer monomer,
                        short thisColix,
                        short thisMad)

renderPending

protected void renderPending()

renderPendingRocketSegment

private void renderPendingRocketSegment(int i,
                              P3 pointStart,
                              P3 pointBeforeEnd,
                              P3 pointEnd,
                              boolean tEnd)

Parameters:

i -

pointStart -

pointBeforeEnd - ignored now that arrow heads protrude beyond end of rocket

pointEnd -

tEnd -

renderCone

protected void renderCone(int i,
              P3 pointBegin,
              P3 pointEnd,
              P3 screenPtBegin,
              P3 screenPtEnd)

Parameters:

i - IGNORED

pointBegin - IGNORED

pointEnd - IGNORED

screenPtBegin -

screenPtEnd -

renderPendingSheet

private void renderPendingSheet(P3 pointStart,
                      P3 pointBeforeEnd,
                      P3 pointEnd,
                      boolean tEnd)

buildBox

void buildBox(P3 pointCorner,
            V3 scaledWidthVector,
            V3 scaledHeightVector,
            V3 lengthVector)

buildArrowHeadBox

void buildArrowHeadBox(P3 pointCorner,
                     V3 scaledWidthVector,
                     V3 scaledHeightVector,
                     P3 pointTip)

drawBox

void drawBox(P3 pointA,
           P3 pointB)

drawArrowHeadBox

void drawArrowHeadBox(P3 base,
                    P3 tip)