org.jmol.api

Interface JmolStateCreator

All Known Implementing Classes:

StateCreator

public interface JmolStateCreator

Method Summary

Methods

Modifier and Type	Method and Description
java.lang.Object	createImagePathCheck(java.lang.String fileName, java.lang.String type, java.lang.String text, byte[] bytes, java.lang.String[] scripts, java.lang.Object appendix, int quality, int width, int height, java.lang.String[] fullPath, boolean doCheck)
java.lang.String	createImageSet(java.lang.String fileName, java.lang.String type, java.lang.String text, byte[] bytes, java.lang.String[] scripts, int quality, int width, int height, BS bsFrames, int nVibes, java.lang.String[] fullPath)
java.lang.String	generateOutputForExport(java.lang.String type, java.lang.String[] fileName, int width, int height)
java.lang.String	getAllSettings(java.lang.String prefix)
java.lang.String	getAtomDefs(java.util.Map<java.lang.String,java.lang.Object> names)
java.lang.String	getAtomicPropertyState(byte taintCoord, BS bsSelected)
void	getAtomicPropertyStateBuffer(SB commands, byte type, BS bs, java.lang.String name, float[] data)
java.lang.String	getAtomShapeSetState(Shape shape, AtomShape[] shapes)
java.lang.String	getAtomShapeState(AtomShape shape)
java.lang.String	getBondState(Shape shape, BS bsOrderSet, boolean reportAll)
java.lang.String	getCommands(java.util.Map<java.lang.String,BS> htDefine, java.util.Map<java.lang.String,BS> htMore, java.lang.String select)
java.lang.String	getFontLineShapeState(java.lang.String s, java.lang.String myType, TickInfo[] tickInfos)
java.lang.String	getFontState(java.lang.String myType, JmolFont font3d)
java.lang.String	getFunctionCalls(java.lang.String selectedFunction)
java.lang.Object	getImageAsWithComment(java.lang.String type, int quality, int width, int height, java.lang.String fileName, java.lang.String[] scripts, java.io.OutputStream os, java.lang.String comment)
java.util.Map<java.lang.String,java.lang.Object>	getInfo(java.lang.Object manager)
java.lang.String	getLoadState(java.util.Map<java.lang.String,java.lang.Object> htParams)
java.lang.String	getMeasurementState(Measures shape, JmolList<Measurement> mList, int measurementCount, JmolFont font3d, TickInfo tickInfo)
java.lang.String	getModelState(SB sfunc, boolean isAll, boolean withProteinStructure)
java.io.OutputStream	getOutputStream(java.lang.String localName, java.lang.String[] fullPath)
void	getShapeSetState(AtomShape atomShape, Shape shape, int monomerCount, Group[] monomers, BS bsSizeDefault, java.util.Map<java.lang.String,BS> temp, java.util.Map<java.lang.String,BS> temp2)
java.lang.String	getShapeState(Shape shape)
java.lang.String	getSpecularState()
java.lang.String	getSpinState(boolean b)
java.lang.String	getStateScript(java.lang.String type, int width, int height)
java.lang.String	getTrajectoryState()
java.lang.Object	getWrappedState(java.lang.String fileName, java.lang.String[] scripts, boolean isImage, boolean asJmolZip, int width, int height)
void	logToFile(java.lang.String data)
void	openFileAsync(java.lang.String fileName, boolean pdbCartoons)
void	quickScript(java.lang.String script)
void	setViewer(Viewer viewer)
void	showEditor(java.lang.String[] file_text)
java.lang.String	streamFileData(java.lang.String fileName, java.lang.String type, java.lang.String type2, int modelIndex, java.lang.Object[] parameters)
void	syncScript(java.lang.String script, java.lang.String applet, int port)
void	undoMoveAction(int action, int n)
void	undoMoveActionClear(int taintedAtom, int type, boolean clearRedo)

Method Detail

setViewer

void setViewer(Viewer viewer)

getWrappedState

java.lang.Object getWrappedState(java.lang.String fileName,
                               java.lang.String[] scripts,
                               boolean isImage,
                               boolean asJmolZip,
                               int width,
                               int height)

getStateScript

java.lang.String getStateScript(java.lang.String type,
                              int width,
                              int height)

getSpinState

java.lang.String getSpinState(boolean b)

getInfo

java.util.Map<java.lang.String,java.lang.Object> getInfo(java.lang.Object manager)

getSpecularState

java.lang.String getSpecularState()

getLoadState

java.lang.String getLoadState(java.util.Map<java.lang.String,java.lang.Object> htParams)

getModelState

java.lang.String getModelState(SB sfunc,
                             boolean isAll,
                             boolean withProteinStructure)

getFontState

java.lang.String getFontState(java.lang.String myType,
                            JmolFont font3d)

getFontLineShapeState

java.lang.String getFontLineShapeState(java.lang.String s,
                                     java.lang.String myType,
                                     TickInfo[] tickInfos)

getShapeSetState

void getShapeSetState(AtomShape atomShape,
                    Shape shape,
                    int monomerCount,
                    Group[] monomers,
                    BS bsSizeDefault,
                    java.util.Map<java.lang.String,BS> temp,
                    java.util.Map<java.lang.String,BS> temp2)

getMeasurementState

java.lang.String getMeasurementState(Measures shape,
                                   JmolList<Measurement> mList,
                                   int measurementCount,
                                   JmolFont font3d,
                                   TickInfo tickInfo)

getBondState

java.lang.String getBondState(Shape shape,
                            BS bsOrderSet,
                            boolean reportAll)

getAtomShapeSetState

java.lang.String getAtomShapeSetState(Shape shape,
                                    AtomShape[] shapes)

getShapeState

java.lang.String getShapeState(Shape shape)

getCommands

java.lang.String getCommands(java.util.Map<java.lang.String,BS> htDefine,
                           java.util.Map<java.lang.String,BS> htMore,
                           java.lang.String select)

getAllSettings

java.lang.String getAllSettings(java.lang.String prefix)

getAtomShapeState

java.lang.String getAtomShapeState(AtomShape shape)

getTrajectoryState

java.lang.String getTrajectoryState()

getFunctionCalls

java.lang.String getFunctionCalls(java.lang.String selectedFunction)

getAtomicPropertyState

java.lang.String getAtomicPropertyState(byte taintCoord,
                                      BS bsSelected)

getAtomicPropertyStateBuffer

void getAtomicPropertyStateBuffer(SB commands,
                                byte type,
                                BS bs,
                                java.lang.String name,
                                float[] data)

undoMoveAction

void undoMoveAction(int action,
                  int n)

undoMoveActionClear

void undoMoveActionClear(int taintedAtom,
                       int type,
                       boolean clearRedo)

createImageSet

java.lang.String createImageSet(java.lang.String fileName,
                              java.lang.String type,
                              java.lang.String text,
                              byte[] bytes,
                              java.lang.String[] scripts,
                              int quality,
                              int width,
                              int height,
                              BS bsFrames,
                              int nVibes,
                              java.lang.String[] fullPath)

createImagePathCheck

java.lang.Object createImagePathCheck(java.lang.String fileName,
                                    java.lang.String type,
                                    java.lang.String text,
                                    byte[] bytes,
                                    java.lang.String[] scripts,
                                    java.lang.Object appendix,
                                    int quality,
                                    int width,
                                    int height,
                                    java.lang.String[] fullPath,
                                    boolean doCheck)

syncScript

void syncScript(java.lang.String script,
              java.lang.String applet,
              int port)

generateOutputForExport

java.lang.String generateOutputForExport(java.lang.String type,
                                       java.lang.String[] fileName,
                                       int width,
                                       int height)

getImageAsWithComment

java.lang.Object getImageAsWithComment(java.lang.String type,
                                     int quality,
                                     int width,
                                     int height,
                                     java.lang.String fileName,
                                     java.lang.String[] scripts,
                                     java.io.OutputStream os,
                                     java.lang.String comment)

streamFileData

java.lang.String streamFileData(java.lang.String fileName,
                              java.lang.String type,
                              java.lang.String type2,
                              int modelIndex,
                              java.lang.Object[] parameters)

getOutputStream

java.io.OutputStream getOutputStream(java.lang.String localName,
                                   java.lang.String[] fullPath)

openFileAsync

void openFileAsync(java.lang.String fileName,
                 boolean pdbCartoons)

showEditor

void showEditor(java.lang.String[] file_text)

logToFile

void logToFile(java.lang.String data)

quickScript

void quickScript(java.lang.String script)

getAtomDefs

java.lang.String getAtomDefs(java.util.Map<java.lang.String,java.lang.Object> names)