Resampler

Resampler can be used to transform an LC/MS map into a resampled map.

pot. predecessor tools	$\longrightarrow$ Resampler $\longrightarrow$	pot. successor tools
-	$\longrightarrow$ Resampler $\longrightarrow$	NoiseFilterSGolay

When writing an peak file, all spectra are resampled with a new sampling rate. The number of spectra does not change.

The command line parameters of this tool are:

Resampler -- Transforms an LC/MS map into a resampled map or a PNG image.
Version: 2.0.0 Aug 25 2015, 00:02:58, Revision: GIT-NOTFOUND

Usage:
  Resampler <options>

Options (mandatory options marked with '*'):
  -in <file>*            Input file  (valid formats: 'mzML')
  -out <file>*           Output file in mzML format (valid formats: 'mzML')
  -sampling_rate <rate>  New sampling rate in m/z dimension (default: '0.1' min: '0')
                         
Common TOPP options:
  -ini <file>            Use the given TOPP INI file
  -threads <n>           Sets the number of threads allowed to be used by the TOPP tool (default: '1')
  -write_ini <file>      Writes the default configuration file
  --help                 Shows options
  --helphelp             Shows all options (including advanced)

INI file documentation of this tool:

Legend:

required parameter

advanced parameter

+ResamplerTransforms an LC/MS map into a resampled map or a PNG image.

version2.0.0 Version of the tool that generated this parameters file.

++1Instance '1' section for 'Resampler'

in input file input file*.mzML

out output file in mzML formatoutput file*.mzML

sampling_rate0.1 New sampling rate in m/z dimension0:∞

log Name of log file (created only when specified)

debug0 Sets the debug level

threads1 Sets the number of threads allowed to be used by the TOPP tool

no_progressfalse Disables progress logging to command linetrue,false

forcefalse Overwrite tool specific checks.true,false

testfalse Enables the test mode (needed for internal use only)true,false