Digests a protein database in-silico.
| pot. predecessor tools |  Digestor | pot. successor tools |
| none (FASTA input) | IDFilter (peptide blacklist) |
This application is used to digest a protein database to get all peptides given a cleavage enzyme. At the moment only trypsin is supported.
The output can be used as a blacklist filter input to IDFilter, to remove certain peptides.
- Note
- Currently mzIdentML (mzid) is not directly supported as an input/output format of this tool. Convert mzid files to/from idXML using IDFileConverter if necessary.
The command line parameters of this tool are:
INI file documentation of this tool: